Diff pysam-0.24.0 with a pysam-9999
| /usr/portage/sci-biology/pysam/pysam-9999.ebuild 2025-08-07 18:21:07.607831902 +0300 | ||
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# Copyright 1999-2026 Gentoo Authors |
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# Copyright 1999-2025 Gentoo Authors |
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# Distributed under the terms of the GNU General Public License v2 |
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EAPI=8 |
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DISTUTILS_EXT=1 |
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DISTUTILS_USE_PEP517=setuptools |
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PYTHON_COMPAT=( python3_{11..14} )
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PYTHON_COMPAT=( python3_{11..13} )
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inherit distutils-r1 |
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LICENSE="MIT" |
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SLOT="0" |
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RDEPEND="=sci-libs/htslib-1.23*:=" |
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RDEPEND=">=sci-libs/htslib-1.21" |
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DEPEND="${RDEPEND}"
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BDEPEND=" |
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>=dev-python/cython-3[${PYTHON_USEDEP}]
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test? ( |
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=sci-biology/bcftools-1.23* |
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=sci-biology/samtools-1.23* |
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>=sci-biology/bcftools-1.21 |
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>=sci-biology/samtools-1.21 |
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)" |
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distutils_enable_tests pytest |
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) |
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python_prepare_all() {
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# unbundle htslib |
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export HTSLIB_MODE="external" |
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export HTSLIB_INCLUDE_DIR="${ESYSROOT}"/usr/include
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