hmmer

Description:Sequence analysis using profile hidden Markov models
License: GPL-3
Homepage:http://hmmer.org/
Location:Portage
Legend:
  • + - stable
  • ~ - unstable
  • M - hardmask
alpha amd64 arm hppa ia64 m68k mips ppc ppc64 s390 sh sparc x86
3.1_beta2 diff - ~ - - - - - - - - - - ~
2.3.2-r4 - ~ - - - - - - - - - - ~

USE flags

  • altivec - Add support for optimizations for G4 and G5/ppc970 processors
  • cpu_flags_x86_sse - Use the SSE instruction set
  • gsl - Use the GNU scientific library for calculations
  • mpi - Add MPI (Message Passing Interface) layer to the apps that support it
  • sse - Use the SSE instruction set
  • static-libs - Build static versions of dynamic libraries as well
  • test - Enable dependencies and/or preparations necessary to run tests (usually controlled by FEATURES=test but can be toggled independently)
  • threads - Add threads support for various packages. Usually pthreads

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Thank you!