probcons-1.12-r1.ebuild
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# Copyright 1999-2023 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7 inherit toolchain-funcs MY_P="${PN}_v${PV/./_}" DESCRIPTION="Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences" HOMEPAGE="http://probcons.stanford.edu/" SRC_URI="http://probcons.stanford.edu/${MY_P}.tar.gz" S="${WORKDIR}/${PN}" LICENSE="public-domain" SLOT="0" KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux" # Gnuplot is explicitly runtime-only, it's run using system() RDEPEND=" !sci-geosciences/gmt sci-visualization/gnuplot" PATCHES=( "${FILESDIR}"/${P}-cxxflags.patch "${FILESDIR}"/gcc-4.3.patch "${FILESDIR}"/${P}-gcc-4.6.patch ) src_compile() { emake \ CXX="$(tc-getCXX)" \ OPT_CXXFLAGS="${CXXFLAGS}" } src_install() { dobin probcons project makegnuplot # Overlap with imagemagick newbin compare compare-probcons dodoc README } pkg_postinst() { ewarn "The 'compare' binary is installed as 'compare-probcons'" ewarn "to avoid overlap with other packages." einfo "You may also want to download the user manual" einfo "from http://probcons.stanford.edu/manual.pdf" } | ||